Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | LK406_15420 | P04339 | + | 3833917 - 3834696 | 29219.0 |
| gtra family protein | LK406_15425 | Not Available | + | 3834689 - 3835099 | 15596.7 |
| mfs transporter | LK406_15430 | Q1JQC1 | - | 3835167 - 3836555 | 50977.6 |
| tetratricopeptide repeat protein | LK406_15435 | Not Available | - | 3836574 - 3838562 | 76420.9 |
| gtpase era | LK406_15440 | B3ETC6 | - | 3838609 - 3839490 | 33284.2 |
| hypothetical protein | LK406_15445 | Not Available | + | 3839840 - 3840037 | 6885.75 |
| signal recognition particle protein | LK406_15450 | P37105 | - | 3840110 - 3841441 | 48947.9 |
| hypothetical protein | LK406_15455 | Not Available | + | 3841565 - 3842314 | 27873.6 |
| duf4294 domain-containing protein | LK406_15460 | Not Available | - | 3842321 - 3842899 | 22474.6 |
| thioesterase family protein | LK406_15465 | Q1EMV2 | + | 3843060 - 3843434 | 12665.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.