Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_15170 | Not Available | - | 3766416 - 3766979 | 21104.0 |
| Trna-ser | Not Available | Not Available | + | 3767031 - 3767122 | Not Available |
| duf4861 domain-containing protein | LK406_15180 | Not Available | + | 3767320 - 3768495 | 44230.7 |
| glycoside hydrolase family 28 protein | LK406_15185 | A7PZL3 | + | 3768614 - 3770293 | 60435.7 |
| pectate lyase | LK406_15190 | B8NQQ7 | + | 3770302 - 3772158 | 67182.4 |
| pectinesterase family protein | LK406_15195 | O31523 | + | 3772183 - 3773805 | 59552.4 |
| response regulator | LK406_15200 | T2KMF4 | + | 3773860 - 3778233 | 163582.0 |
| glycoside hydrolase family 88 protein | LK406_15205 | O34559 | + | 3778230 - 3779459 | 45823.5 |
| tonb-dependent receptor | LK406_15210 | T2KPJ3 | + | 3779925 - 3783161 | 118525.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_15215 | T2KPM5 | + | 3783190 - 3785079 | 71253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.