Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LK406_15120 | P17315 | - | 3754511 - 3757348 | 104927.0 |
| imp dehydrogenase | LK406_15125 | O67820 | + | 3757624 - 3759102 | 52552.4 |
| duf3795 domain-containing protein | LK406_15130 | Not Available | + | 3759105 - 3759440 | 12348.0 |
| glutamine-hydrolyzing gmp synthase | LK406_15135 | Q11WK3 | + | 3759452 - 3760978 | 55833.2 |
| 3'-5' exonuclease | LK406_15140 | Q819Y5 | + | 3761235 - 3761729 | 18318.8 |
| opro/oprp family phosphate-selective porin | LK406_15145 | Not Available | - | 3761768 - 3763030 | 47959.0 |
| cold shock domain-containing protein | LK406_15150 | Q83RI9 | + | 3763401 - 3763847 | 16645.7 |
| rna-binding protein | LK406_15155 | Q57014 | + | 3763883 - 3764200 | 11237.9 |
| putative dna modification/repair radical sam protein | LK406_15160 | Not Available | + | 3764375 - 3765634 | 47938.9 |
| tigr03915 family putative dna repair protein | LK406_15165 | Not Available | + | 3765639 - 3766400 | 29925.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.