Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_15070 | Not Available | + | 3741849 - 3742694 | 31644.4 |
| glutamine--trna ligase/yqey domain fusion protein | LK406_15075 | Q7UX42 | - | 3742825 - 3744501 | 64505.5 |
| hypothetical protein | LK406_15080 | Not Available | - | 3744511 - 3745617 | 42102.0 |
| rna methyltransferase | LK406_15085 | Q8DCT8 | + | 3745708 - 3746244 | 19162.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | LK406_15090 | Q5LD96 | + | 3746569 - 3747384 | 29491.8 |
| hmuy family protein | LK406_15095 | Not Available | - | 3747457 - 3747858 | 13986.3 |
| thiol protease | LK406_15100 | Not Available | - | 3747873 - 3749414 | 56650.1 |
| hypothetical protein | LK406_15105 | Not Available | - | 3749414 - 3751594 | 83462.0 |
| hypothetical protein | LK406_15110 | Not Available | - | 3751618 - 3753180 | 58022.8 |
| duf4876 domain-containing protein | LK406_15115 | Not Available | - | 3753274 - 3754470 | 42848.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.