Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | LK406_14220 | Q72H90 | - | 3529904 - 3530032 | 4705.66 |
| site-specific integrase | LK406_14225 | B6IPE2 | + | 3530496 - 3531773 | 49730.1 |
| arac family transcriptional regulator | LK406_14230 | P26993 | - | 3531998 - 3532966 | 37255.2 |
| duf3575 domain-containing protein | LK406_14235 | Not Available | + | 3533344 - 3533907 | 21278.1 |
| ompa family protein | LK406_14240 | Q9S3R9 | + | 3533910 - 3535448 | 57862.8 |
| fimb/mfa2 family fimbrial subunit | LK406_14245 | Not Available | + | 3535491 - 3536501 | 37654.7 |
| hypothetical protein | LK406_14250 | Not Available | + | 3536578 - 3537699 | 40643.9 |
| fimbrial protein | LK406_14255 | Not Available | + | 3537725 - 3539743 | 74278.0 |
| duf5106 domain-containing protein | LK406_14260 | Not Available | + | 3539937 - 3540893 | 34837.7 |
| duf1573 domain-containing protein | LK406_14265 | Not Available | + | 3540908 - 3541288 | 13859.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.