Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_14170 | Not Available | - | 3522210 - 3522866 | 24689.3 |
| relaxase/mobilization nuclease domain-containing protein | LK406_14175 | Q00191 | - | 3522869 - 3523792 | 35468.3 |
| mobc family plasmid mobilization relaxosome protein | LK406_14180 | Not Available | - | 3523789 - 3524166 | 14224.5 |
| duf3408 domain-containing protein | LK406_14185 | Not Available | - | 3524376 - 3524918 | 20618.3 |
| helix-turn-helix domain-containing protein | LK406_14190 | Not Available | + | 3525334 - 3525645 | 12433.0 |
| helix-turn-helix domain-containing protein | LK406_14195 | Not Available | + | 3525699 - 3526004 | 12011.3 |
| hypothetical protein | LK406_14200 | Not Available | - | 3526349 - 3526723 | 14279.4 |
| site-specific integrase | LK406_14205 | A5D2W6 | - | 3526745 - 3527965 | 47381.7 |
| site-specific integrase | LK406_14210 | Q93C64 | - | 3527979 - 3529208 | 47037.3 |
| superoxide dismutase | LK406_14215 | Q5JHA3 | + | 3529500 - 3529691 | 6913.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.