Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | LK406_14070 | Q87RD1 | + | 3496709 - 3497416 | 24980.8 |
| hypothetical protein | LK406_14075 | Not Available | + | 3497432 - 3497983 | 20630.9 |
| dna recombination protein rmuc | LK406_14080 | Q9JWG3 | - | 3498028 - 3499455 | 53862.7 |
| duf4836 family protein | LK406_14085 | Not Available | + | 3499612 - 3501186 | 55480.0 |
| atp-binding cassette domain-containing protein | LK406_14090 | P57030 | + | 3501254 - 3501901 | 23656.4 |
| abc transporter permease | LK406_14095 | Not Available | + | 3501898 - 3503097 | 43333.9 |
| ribulose-phosphate 3-epimerase | LK406_14100 | P74061 | + | 3503260 - 3503910 | 22828.8 |
| hd domain-containing protein | LK406_14105 | Q7Z4H3 | - | 3503900 - 3504460 | 21130.1 |
| abc-f family atp-binding cassette domain-containing protein | LK406_14110 | Q9FIB4 | + | 3504540 - 3506492 | 74094.3 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | LK406_14115 | Q06753 | + | 3506485 - 3507222 | 26730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.