Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_13970 | Not Available | - | 3474318 - 3474632 | 11067.8 |
| translational gtpase typa | LK406_13975 | P0A3B2 | - | 3474645 - 3476447 | 66923.8 |
| 3-dehydroquinate synthase | LK406_13980 | A1AQL5 | + | 3476529 - 3477545 | 36592.4 |
| malate dehydrogenase | LK406_13985 | E1V8J1 | - | 3477619 - 3478899 | 46173.7 |
| holliday junction branch migration dna helicase ruvb | LK406_13990 | A6KZW5 | - | 3479207 - 3480214 | 36680.3 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_13995 | T2KMH0 | - | 3480302 - 3482716 | 88928.6 |
| nigd-like protein | LK406_14000 | Not Available | - | 3482903 - 3483628 | 27024.5 |
| sigma-70 family rna polymerase sigma factor | LK406_14005 | P0AGB8 | + | 3483764 - 3484312 | 21008.1 |
| port family protein | LK406_14010 | Not Available | + | 3484322 - 3485656 | 47058.3 |
| Trna-arg | Not Available | Not Available | + | 3485877 - 3485951 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.