Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | LK406_13870 | Q82Z76 | - | 3449589 - 3450338 | 27889.4 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_13875 | T2KPM5 | - | 3450421 - 3451833 | 52796.6 |
| susc/raga family tonb-linked outer membrane protein | LK406_13880 | T2KPJ3 | - | 3451846 - 3455226 | 126479.0 |
| zinc-dependent metalloprotease | LK406_13885 | Not Available | - | 3455382 - 3458009 | 99429.2 |
| histidine kinase | LK406_13890 | P0AD15 | - | 3458137 - 3459669 | 58435.3 |
| sdr family nad(p)-dependent oxidoreductase | LK406_13895 | P25970 | - | 3459700 - 3460434 | 27315.4 |
| hypothetical protein | LK406_13900 | Not Available | - | 3460542 - 3460967 | 15626.8 |
| dcmp deaminase family protein | LK406_13905 | P32393 | - | 3460976 - 3461413 | 16345.6 |
| preprotein translocase subunit seca | LK406_13910 | A6L997 | - | 3461515 - 3464808 | 124888.0 |
| hypothetical protein | LK406_13915 | Not Available | - | 3464913 - 3465854 | 36204.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.