Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | LK406_13720 | A5FG89 | + | 3420742 - 3423168 | 89638.5 |
| mmcq/yjbr family dna-binding protein | LK406_13725 | P0AAT3 | + | 3423169 - 3423555 | 15112.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | LK406_13730 | A6L5J0 | + | 3423552 - 3424310 | 28219.6 |
| 3-deoxy-8-phosphooctulonate synthase | LK406_13735 | Q31KV0 | + | 3424553 - 3425305 | 26951.6 |
| kpsf/gutq family sugar-phosphate isomerase | LK406_13740 | Q8FDQ2 | + | 3425306 - 3426271 | 34389.0 |
| ycii family protein | LK406_13745 | Not Available | + | 3426279 - 3426563 | 10573.7 |
| pas domain-containing protein | LK406_13750 | Not Available | - | 3426595 - 3426933 | 12784.4 |
| chloride channel protein | LK406_13755 | Q8XTT4 | - | 3426936 - 3428717 | 65846.6 |
| tryptophan--trna ligase | LK406_13760 | Q46127 | - | 3428804 - 3429934 | 42083.3 |
| hydrogen peroxide-inducible genes activator | LK406_13765 | Q9X725 | + | 3430142 - 3431041 | 33417.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.