Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | LK406_13670 | P39694 | - | 3404796 - 3405851 | 39435.9 |
| n-acetylmuramic acid 6-phosphate etherase | LK406_13675 | B2RK20 | - | 3405844 - 3406668 | 29795.8 |
| atpase | LK406_13680 | Not Available | - | 3406658 - 3407479 | 29600.3 |
| hypothetical protein | LK406_13685 | Q9K1H0 | - | 3407703 - 3409538 | 70038.6 |
| trar/dksa c4-type zinc finger protein | LK406_13690 | P42408 | - | 3409736 - 3410116 | 14413.3 |
| isoleucine--trna ligase | LK406_13695 | Q5LCU8 | - | 3410196 - 3413591 | 127959.0 |
| hamp domain-containing histidine kinase | LK406_13700 | Q03228 | - | 3413704 - 3415188 | 55942.8 |
| abc transporter atp-binding protein/permease | LK406_13705 | Q2LVL0 | - | 3415241 - 3417070 | 68176.9 |
| ribonuclease hi | LK406_13710 | A4J7B3 | - | 3417360 - 3417824 | 17323.6 |
| valine--trna ligase | LK406_13715 | A6LIG7 | - | 3418001 - 3420628 | 99448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.