Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_13520 | P48840 | + | 3362320 - 3363780 | 56500.5 |
| hypothetical protein | LK406_13525 | P48840 | + | 3363773 - 3365245 | 56005.1 |
| pkd domain-containing protein | LK406_13530 | Not Available | + | 3365258 - 3366610 | 50170.1 |
| pkd domain-containing protein | LK406_13535 | Not Available | + | 3366629 - 3368332 | 61440.7 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_13540 | Q56078 | + | 3368421 - 3370616 | 80335.8 |
| beta-glucuronidase | LK406_13545 | T2KPJ7 | + | 3370627 - 3372456 | 69816.0 |
| response regulator | LK406_13550 | T2KMF4 | + | 3372576 - 3376571 | 148630.0 |
| polyketide cyclase | LK406_13555 | Not Available | - | 3376803 - 3377207 | 15336.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | LK406_13560 | P0AF68 | - | 3377233 - 3377649 | 15763.6 |
| pglz domain-containing protein | LK406_13565 | P35163 | - | 3377650 - 3379200 | 59886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.