Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_13470 | Not Available | - | 3343934 - 3345199 | 47401.5 |
| hypothetical protein | LK406_13475 | Q56307 | - | 3345214 - 3346563 | 50790.1 |
| asparagine--trna ligase | LK406_13480 | A6LIA1 | + | 3347037 - 3348425 | 52751.8 |
| rna polymerase factor sigma-54 | LK406_13485 | P26979 | + | 3348606 - 3350027 | 55261.2 |
| hypothetical protein | LK406_13490 | Not Available | + | 3350267 - 3350875 | 21980.3 |
| tonb-dependent receptor | LK406_13495 | T2KPJ3 | + | 3351189 - 3354401 | 118840.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_13500 | T2KN63 | + | 3354423 - 3356279 | 69415.2 |
| susc/raga family tonb-linked outer membrane protein | LK406_13505 | T2KM18 | + | 3356305 - 3359472 | 117823.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_13510 | T2KPM5 | + | 3359484 - 3361298 | 69078.1 |
| duf1735 domain-containing protein | LK406_13515 | Not Available | + | 3361326 - 3362315 | 35948.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.