Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | LK406_13220 | P83847 | + | 3274650 - 3275699 | 39218.9 |
| calcium/sodium antiporter | LK406_13225 | Q0ZAI3 | - | 3275675 - 3276628 | 33198.8 |
| zinc transporter zupt | LK406_13230 | Q8ENQ1 | - | 3276674 - 3277477 | 28106.1 |
| superoxide dismutase | LK406_13235 | Not Available | + | 3277968 - 3279196 | 44386.7 |
| duf3408 domain-containing protein | LK406_13240 | Not Available | - | 3279493 - 3279990 | 18941.6 |
| superoxide dismutase | LK406_13245 | Not Available | + | 3280444 - 3280875 | 17307.7 |
| superoxide dismutase | LK406_13250 | O26979 | + | 3280917 - 3281171 | 9386.53 |
| glycoside hydrolase family 88 protein | LK406_13255 | P9WF04 | - | 3281234 - 3282319 | 40725.7 |
| heparinase ii/iii family protein | LK406_13260 | Not Available | - | 3282342 - 3284267 | 71781.9 |
| helix-turn-helix domain-containing protein | LK406_13265 | T2KMF4 | - | 3284417 - 3288469 | 151791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.