Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_13020 | Not Available | + | 3223582 - 3223947 | 13177.7 |
| bacon domain-containing protein | LK406_13025 | Not Available | - | 3224214 - 3225770 | 56092.8 |
| hypothetical protein | LK406_13030 | Not Available | - | 3225783 - 3227099 | 48289.7 |
| cell surface protein | LK406_13035 | Not Available | - | 3227117 - 3228364 | 46960.6 |
| ynce family protein | LK406_13040 | Not Available | - | 3228361 - 3229518 | 43132.4 |
| tonb-dependent receptor | LK406_13045 | A7MXY8 | - | 3229531 - 3231600 | 79225.9 |
| sulfatase | LK406_13050 | T2KMG7 | + | 3232045 - 3233604 | 59680.3 |
| fecr domain-containing protein | LK406_13055 | P23485 | + | 3233801 - 3234811 | 37700.0 |
| susc/raga family tonb-linked outer membrane protein | LK406_13060 | T2KPJ3 | + | 3234847 - 3238470 | 131673.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | LK406_13065 | Not Available | + | 3238489 - 3239991 | 57847.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.