Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_12970 | Not Available | - | 3211955 - 3212725 | 29745.8 |
| relaxase/mobilization nuclease domain-containing protein | LK406_12975 | P22898 | - | 3212744 - 3213814 | 39745.9 |
| mobc family plasmid mobilization relaxosome protein | LK406_12980 | Not Available | - | 3213804 - 3214172 | 13641.0 |
| toprim domain-containing protein | LK406_12985 | P52308 | - | 3214274 - 3215296 | 38111.7 |
| virulence-associated e family protein | LK406_12990 | Not Available | - | 3215524 - 3216732 | 46282.9 |
| helix-turn-helix domain-containing protein | LK406_12995 | Not Available | - | 3216722 - 3217033 | 11719.1 |
| duf6043 family protein | LK406_13000 | Not Available | - | 3217189 - 3218118 | 35541.6 |
| putative dna binding domain-containing protein | LK406_13005 | O50224 | - | 3218128 - 3219588 | 55227.2 |
| site-specific integrase | LK406_13010 | Not Available | - | 3219656 - 3221005 | 52829.6 |
| putative transporter | LK406_13015 | Q64TC3 | + | 3221802 - 3223484 | 59293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.