Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | LK406_12770 | Not Available | - | 3156341 - 3157106 | 29664.5 |
| glycoside hydrolase family 43 protein | LK406_12775 | P49943 | - | 3157495 - 3158550 | 39158.7 |
| alpha-l-fucosidase | LK406_12780 | Q99KR8 | - | 3158659 - 3160056 | 54254.4 |
| duf5013 domain-containing protein | LK406_12785 | Not Available | - | 3160110 - 3161342 | 45284.0 |
| duf5126 domain-containing protein | LK406_12790 | Not Available | - | 3161372 - 3162580 | 45768.5 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_12795 | T2KN63 | - | 3162609 - 3164570 | 75480.6 |
| tonb-dependent receptor | LK406_12800 | T2KPJ3 | - | 3164583 - 3167756 | 117784.0 |
| putative ig domain-containing protein | LK406_12805 | Q55B10 | - | 3167847 - 3170057 | 83255.4 |
| glycoside hydrolase family 43 protein | LK406_12810 | Q45071 | - | 3170092 - 3171027 | 35402.9 |
| helix-turn-helix domain-containing protein | LK406_12815 | T2KMF4 | + | 3171196 - 3175224 | 151186.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.