Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | LK406_12670 | G8QM61 | + | 3133612 - 3134130 | 19915.0 |
| hypothetical protein | LK406_12675 | Not Available | + | 3134105 - 3134527 | 16032.1 |
| outer membrane beta-barrel protein | LK406_12680 | Not Available | + | 3134540 - 3135364 | 29570.8 |
| duf4252 domain-containing protein | LK406_12685 | Not Available | + | 3135377 - 3135859 | 18131.2 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | LK406_12690 | P08066 | - | 3136232 - 3136975 | 26659.9 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | LK406_12695 | P08065 | - | 3137014 - 3138960 | 71689.2 |
| succinate dehydrogenase cytochrome b subunit | LK406_12700 | Not Available | - | 3138997 - 3139692 | 25498.7 |
| 5-formyltetrahydrofolate cyclo-ligase | LK406_12705 | A0R3H2 | + | 3139824 - 3140360 | 19486.4 |
| patatin-like phospholipase family protein | LK406_12710 | P9WIY8 | + | 3140442 - 3141233 | 28460.8 |
| nadp-specific glutamate dehydrogenase | LK406_12715 | P94598 | - | 3141612 - 3142967 | 49548.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.