Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 | LK406_12470 | T2KPJ7 | - | 3085732 - 3088389 | 99931.8 |
| dnrlre domain-containing protein | LK406_12475 | Not Available | - | 3088442 - 3090103 | 64719.0 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_12480 | P33363 | - | 3090105 - 3092348 | 81635.7 |
| beta-glucosidase | LK406_12485 | A6LGF6 | - | 3092368 - 3093762 | 51309.4 |
| beta-glucosidase | LK406_12490 | A6LGF6 | - | 3093767 - 3095116 | 50553.6 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_12495 | Q8A1G2 | - | 3095182 - 3097074 | 70925.8 |
| susc/raga family tonb-linked outer membrane protein | LK406_12500 | T2KM18 | - | 3097086 - 3100424 | 124895.0 |
| fecr domain-containing protein | LK406_12505 | Not Available | - | 3100437 - 3101471 | 39310.5 |
| bacon domain-containing protein | LK406_12510 | Q18DN4 | - | 3101499 - 3103175 | 56023.2 |
| enoyl-acp reductase | LK406_12515 | P58381 | + | 3103419 - 3104291 | 31936.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.