Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | LK406_12270 | Q46791 | + | 3025078 - 3025827 | 28880.3 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | LK406_12275 | O86564 | - | 3025902 - 3027107 | 43202.4 |
| Trna-arg | Not Available | Not Available | + | 3027181 - 3027255 | Not Available |
| outer membrane protein transport protein | LK406_12285 | Q9K1M2 | - | 3027318 - 3028799 | 53482.5 |
| pyridoxal phosphate-dependent aminotransferase | LK406_12290 | O58489 | - | 3029016 - 3030212 | 44921.2 |
| hu family dna-binding protein | LK406_12295 | Q87E48 | - | 3030237 - 3030497 | 9593.82 |
| Trna-ser | Not Available | Not Available | + | 3030669 - 3030756 | Not Available |
| recombinase family protein | LK406_12305 | P07945 | - | 3031616 - 3032311 | 26973.9 |
| duf3575 domain-containing protein | LK406_12310 | Not Available | + | 3032938 - 3034266 | 51233.4 |
| duf5119 domain-containing protein | LK406_12315 | A7LXW1 | + | 3034295 - 3035182 | 31855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.