Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | LK406_12120 | Not Available | - | 2996209 - 2997513 | 49115.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | LK406_12125 | Q8A7Z7 | - | 2997740 - 2998360 | 22664.1 |
| imidazole glycerol phosphate synthase subunit hisf | LK406_12130 | A6L6Z2 | - | 2998368 - 2999120 | 26452.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | LK406_12135 | Q11VM2 | - | 2999102 - 2999830 | 26360.7 |
| imidazole glycerol phosphate synthase subunit hish | LK406_12140 | Q8A7Z4 | - | 2999835 - 3000431 | 21384.9 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | LK406_12145 | Q8ABA7 | - | 3000428 - 3001555 | 41036.8 |
| histidinol-phosphate transaminase | LK406_12150 | A6L2V8 | - | 3001552 - 3002586 | 38112.7 |
| histidinol dehydrogenase | LK406_12155 | Q64RE7 | - | 3002583 - 3003878 | 46398.4 |
| atp phosphoribosyltransferase | LK406_12160 | A6LAM0 | - | 3003894 - 3004745 | 31207.1 |
| cupin domain-containing protein | LK406_12165 | P0A9U6 | + | 3005097 - 3005654 | 20908.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.