Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4434 domain-containing protein | LK406_12070 | Not Available | - | 2981460 - 2982536 | 41557.0 |
| duf4434 domain-containing protein | LK406_12075 | Not Available | - | 2982533 - 2983471 | 36300.8 |
| rok family transcriptional regulator | LK406_12080 | Q44406 | + | 2983797 - 2985002 | 44047.7 |
| alpha-n-acetylglucosaminidase | LK406_12085 | P54802 | - | 2985080 - 2987221 | 82477.3 |
| phosphodiester glycosidase family protein | LK406_12090 | O31980 | + | 2987421 - 2988491 | 38117.1 |
| is982 family transposase | LK406_12095 | Not Available | + | 2988666 - 2989589 | 35189.9 |
| duf3127 domain-containing protein | LK406_12100 | Not Available | - | 2990392 - 2990754 | 13789.2 |
| twin-arginine translocase tata/tate family subunit | LK406_12105 | A5FL65 | - | 2991211 - 2991393 | 6851.77 |
| duf1080 domain-containing protein | LK406_12110 | Not Available | - | 2991503 - 2994880 | 118692.0 |
| gfo/idh/moca family oxidoreductase | LK406_12115 | B5F3F4 | - | 2994907 - 2996187 | 47811.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.