Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 97 protein | LK406_12020 | G8JZS4 | - | 2965338 - 2967347 | 75343.5 |
| calcineurin-like phosphoesterase family protein | LK406_12025 | Q8YLG0 | - | 2967355 - 2968830 | 55789.6 |
| glycoside hydrolase family 97 protein | LK406_12030 | Q8A6L0 | - | 2968827 - 2970794 | 74138.0 |
| family 10 glycosylhydrolase | LK406_12035 | P35824 | - | 2970811 - 2972148 | 50870.2 |
| family 10 glycosylhydrolase | LK406_12040 | P35824 | - | 2972153 - 2973325 | 45135.7 |
| duf5018 domain-containing protein | LK406_12045 | Not Available | - | 2973547 - 2974905 | 47996.2 |
| hypothetical protein | LK406_12050 | Not Available | - | 2974949 - 2975332 | 14102.9 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_12055 | A7LXT5 | - | 2975359 - 2977014 | 62055.4 |
| tonb-dependent receptor | LK406_12060 | T2KPJ3 | - | 2977035 - 2980166 | 115073.0 |
| age family epimerase/isomerase | LK406_12065 | Q2KIS1 | - | 2980283 - 2981449 | 45319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.