Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | LK406_11870 | Q5LGW9 | - | 2918481 - 2919890 | 52522.0 |
| right-handed parallel beta-helix repeat-containing protein | LK406_11875 | Not Available | + | 2920354 - 2922135 | 61338.7 |
| rna polymerase sigma-70 factor | LK406_11880 | Q45585 | + | 2922298 - 2922852 | 21948.7 |
| fecr domain-containing protein | LK406_11885 | Not Available | + | 2922913 - 2923935 | 37998.4 |
| tonb-dependent receptor | LK406_11890 | T2KPJ3 | + | 2924026 - 2927502 | 128851.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_11895 | T2KNB8 | + | 2927516 - 2929303 | 67876.6 |
| endonuclease/exonuclease/phosphatase family protein | LK406_11900 | Not Available | + | 2929384 - 2930292 | 32530.5 |
| alpha-n-acetylglucosaminidase c-terminal domain-containing protein | LK406_11905 | T2KMH0 | + | 2930294 - 2934988 | 173017.0 |
| duf4091 domain-containing protein | LK406_11910 | Not Available | + | 2935006 - 2936775 | 66173.0 |
| right-handed parallel beta-helix repeat-containing protein | LK406_11915 | Not Available | - | 2936931 - 2938676 | 64165.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.