Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | LK406_11820 | Q9JYI8 | + | 2908882 - 2909994 | 40692.0 |
| site-specific integrase | LK406_11825 | Q980D9 | + | 2910297 - 2911526 | 47126.0 |
| hypothetical protein | LK406_11830 | Not Available | + | 2912674 - 2912922 | 9026.78 |
| sigma-70 family rna polymerase sigma factor | LK406_11835 | Not Available | + | 2913409 - 2913966 | 21503.7 |
| hypothetical protein | LK406_11840 | Not Available | + | 2914213 - 2914662 | 16768.4 |
| nucleotidyl transferase abieii/abigii toxin family protein | LK406_11845 | O66416 | - | 2914680 - 2915399 | 27542.0 |
| hypothetical protein | LK406_11850 | Not Available | - | 2915354 - 2915680 | 13055.8 |
| duf3408 domain-containing protein | LK406_11855 | Not Available | - | 2915864 - 2916382 | 19595.2 |
| hypothetical protein | LK406_11860 | Not Available | + | 2916838 - 2917128 | 11471.8 |
| superoxide dismutase | LK406_11865 | B1N1A3 | + | 2917675 - 2917959 | 11207.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.