Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | LK406_11420 | Not Available | - | 2813909 - 2814112 | 7362.75 |
| alpha/beta hydrolase | LK406_11425 | A0KF11 | - | 2814175 - 2814984 | 29868.2 |
| hypothetical protein | LK406_11430 | Not Available | - | 2814996 - 2815190 | 7665.79 |
| diaminopimelate epimerase | LK406_11435 | A6GYX5 | - | 2815210 - 2816016 | 29183.3 |
| nitroreductase family protein | LK406_11440 | O30013 | + | 2816149 - 2816895 | 28166.8 |
| bama/tama family outer membrane protein | LK406_11445 | Q9K1H0 | + | 2816900 - 2819302 | 91975.6 |
| helix-turn-helix domain-containing protein | LK406_11450 | P11765 | - | 2819459 - 2820370 | 34508.5 |
| omph family outer membrane protein | LK406_11455 | Not Available | - | 2820570 - 2821112 | 20247.2 |
| omph family outer membrane protein | LK406_11460 | Not Available | - | 2821140 - 2821649 | 19057.8 |
| outer membrane protein assembly factor bama | LK406_11465 | Q9K1H0 | - | 2821745 - 2824285 | 96461.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.