Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_11370 | P14002 | + | 2801721 - 2803775 | 74485.3 |
| Trna-leu | Not Available | Not Available | + | 2804129 - 2804213 | Not Available |
| lipoprotein signal peptidase | LK406_11380 | B2RI39 | - | 2804283 - 2804897 | 23193.9 |
| s8 family serine peptidase | LK406_11385 | P42780 | + | 2805117 - 2807183 | 73445.2 |
| 16s ribosomal rna | Not Available | Not Available | + | 2807642 - 2809169 | Not Available |
| Trna-ile | Not Available | Not Available | + | 2809273 - 2809346 | Not Available |
| Trna-ala | Not Available | Not Available | + | 2809363 - 2809436 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 2809529 - 2812401 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 2812507 - 2812620 | Not Available |
| endonuclease/exonuclease/phosphatase family protein | LK406_11415 | Q9GUC9 | + | 2812737 - 2813780 | 38238.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.