Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | LK406_11220 | Not Available | - | 2754904 - 2756379 | 56452.6 |
| susc/raga family tonb-linked outer membrane protein | LK406_11225 | T2KMI3 | - | 2756396 - 2759962 | 132654.0 |
| fecr domain-containing protein | LK406_11230 | Not Available | - | 2760124 - 2761068 | 35026.9 |
| rna polymerase sigma-70 factor | LK406_11235 | Q45585 | - | 2761138 - 2761725 | 22250.9 |
| sdr family oxidoreductase | LK406_11240 | O31767 | - | 2761843 - 2762634 | 29287.1 |
| site-specific integrase | LK406_11245 | B5YFZ8 | + | 2762904 - 2764307 | 53907.9 |
| duf6088 family protein | LK406_11250 | Not Available | + | 2764365 - 2764973 | 22782.3 |
| nucleotidyl transferase abieii/abigii toxin family protein | LK406_11255 | Not Available | + | 2764963 - 2765976 | 39886.6 |
| hypothetical protein | LK406_11260 | Not Available | + | 2765979 - 2766734 | 28713.5 |
| helix-turn-helix domain-containing protein | LK406_11265 | Not Available | + | 2766947 - 2767252 | 11544.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.