Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | LK406_10795 | P44790 | + | 2668482 - 2669066 | 22545.3 |
| hypothetical protein | LK406_10800 | Not Available | + | 2669130 - 2669279 | 5723.51 |
| duf488 family protein | LK406_10805 | P9WL10 | + | 2669376 - 2669774 | 15231.0 |
| duf308 domain-containing protein | LK406_10810 | Not Available | - | 2669802 - 2670389 | 21088.8 |
| dna-3-methyladenine glycosylase i | LK406_10815 | P05100 | - | 2670485 - 2671072 | 22524.8 |
| duf4886 domain-containing protein | LK406_10820 | Not Available | - | 2671141 - 2672076 | 34786.4 |
| hypothetical protein | LK406_10825 | Not Available | - | 2672358 - 2673095 | 27683.1 |
| glycoside hydrolase family 31 protein | LK406_10830 | Q9P999 | - | 2673123 - 2675735 | 100341.0 |
| endonuclease/exonuclease/phosphatase family protein | LK406_10835 | Q5UQW5 | - | 2675747 - 2676640 | 33014.5 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_10840 | T2KNB8 | - | 2676723 - 2678543 | 69049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.