Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_10645 | Not Available | + | 2615513 - 2615776 | 10110.4 |
| Trna-ser | Not Available | Not Available | + | 2616237 - 2616326 | Not Available |
| hypothetical protein | LK406_10655 | Not Available | + | 2616606 - 2617745 | 41460.6 |
| outer membrane protein transport protein | LK406_10660 | Not Available | + | 2617776 - 2619467 | 61825.2 |
| proline--trna ligase | LK406_10665 | Q8A988 | + | 2619563 - 2621047 | 56390.6 |
| site-specific integrase | LK406_10670 | A8F7B4 | + | 2621372 - 2622643 | 48888.3 |
| duf3408 domain-containing protein | LK406_10675 | Not Available | - | 2622874 - 2623392 | 19416.0 |
| duf4091 domain-containing protein | LK406_10680 | Not Available | - | 2623929 - 2625650 | 64655.8 |
| glycoside hydrolase family 127 protein | LK406_10685 | E8MGH8 | - | 2625671 - 2627608 | 72619.9 |
| glycoside hydrolase family 3 protein | LK406_10690 | Q46684 | - | 2627621 - 2629855 | 82615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.