Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dam family site-specific dna-(adenine-n6)-methyltransferase | LK406_10595 | Q58015 | + | 2603630 - 2605516 | 72929.9 |
| duf262 domain-containing protein | LK406_10600 | Not Available | + | 2605518 - 2607125 | 62325.3 |
| duf3696 domain-containing protein | LK406_10605 | Not Available | + | 2607103 - 2608368 | 47808.2 |
| hypothetical protein | LK406_10610 | Not Available | + | 2608368 - 2609177 | 31124.6 |
| superoxide dismutase | LK406_10615 | P19766 | - | 2609447 - 2609929 | 18674.7 |
| atp-binding protein | LK406_10620 | Q58939 | + | 2610353 - 2611546 | 45297.3 |
| hypothetical protein | LK406_10625 | P03832 | - | 2611920 - 2612225 | 12022.9 |
| hypothetical protein | LK406_10630 | P03828 | - | 2612156 - 2612560 | 15289.6 |
| superoxide dismutase | LK406_10635 | Not Available | + | 2613579 - 2614489 | 33322.2 |
| leucine-rich repeat domain-containing protein | LK406_10640 | Not Available | + | 2614465 - 2615310 | 30490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.