Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | LK406_10395 | Not Available | + | 2543044 - 2544093 | 37298.8 |
| pepsy-associated tm helix domain-containing protein | LK406_10400 | Not Available | - | 2544168 - 2544758 | 21994.7 |
| hypothetical protein | LK406_10405 | Not Available | - | 2544730 - 2545263 | 19276.0 |
| triose-phosphate isomerase | LK406_10410 | A6LFF0 | - | 2545535 - 2546293 | 26737.1 |
| lysine--trna ligase | LK406_10415 | Q5L9E5 | - | 2546317 - 2548044 | 66361.5 |
| dna/rna non-specific endonuclease | LK406_10420 | Not Available | + | 2548274 - 2549764 | 53699.3 |
| phosphatase pap2 family protein | LK406_10425 | Q8A6M3 | - | 2549793 - 2550440 | 23878.7 |
| mboat family protein | LK406_10430 | Q51392 | - | 2550448 - 2551953 | 57106.9 |
| hypothetical protein | LK406_10435 | Not Available | - | 2551950 - 2553551 | 58613.5 |
| zinc metallopeptidase | LK406_10440 | O05248 | - | 2553559 - 2554308 | 26795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.