Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ519_02420 | P48840 | - | 609835 - 611295 | 56500.5 |
| duf1735 domain-containing protein | NQ519_02425 | Not Available | - | 611300 - 612289 | 35948.3 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_02430 | T2KPM5 | - | 612317 - 614131 | 69078.1 |
| susc/raga family tonb-linked outer membrane protein | NQ519_02435 | T2KM18 | - | 614143 - 617310 | 117823.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_02440 | T2KN63 | - | 617336 - 619192 | 69415.2 |
| tonb-dependent receptor | NQ519_02445 | T2KPJ3 | - | 619214 - 622426 | 118840.0 |
| hypothetical protein | NQ519_02450 | Not Available | - | 622740 - 623348 | 21980.3 |
| rna polymerase factor sigma-54 | NQ519_02455 | P26979 | - | 623588 - 625009 | 55261.2 |
| asparagine--trna ligase | NQ519_02460 | A6LIA1 | - | 625190 - 626578 | 52751.8 |
| hypothetical protein | NQ519_02465 | Q56307 | + | 627052 - 628401 | 50790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.