Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | LK406_08795 | Not Available | - | 2143889 - 2146147 | 85487.4 |
| susc/raga family tonb-linked outer membrane protein | LK406_08800 | T2KPJ3 | - | 2146161 - 2149256 | 114383.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_08805 | T2KPM5 | - | 2149289 - 2151175 | 70945.0 |
| tonb-dependent receptor | LK406_08810 | T2KPJ3 | - | 2151195 - 2154380 | 116456.0 |
| response regulator | LK406_08815 | T2KMF4 | + | 2154684 - 2158715 | 152306.0 |
| duf5722 domain-containing protein | LK406_08820 | Not Available | - | 2158657 - 2160363 | 63995.7 |
| hypothetical protein | LK406_08825 | Not Available | - | 2160371 - 2163061 | 100590.0 |
| 50s ribosomal protein l25 | LK406_08830 | Q89YZ1 | + | 2163315 - 2163887 | 20490.2 |
| aminoacyl-trna hydrolase | LK406_08835 | A6L6X1 | + | 2163896 - 2164459 | 20741.1 |
| rna-binding s4 domain-containing protein | LK406_08840 | P0ACH0 | - | 2165279 - 2165674 | 15321.2 |
Pathways
1348 pathways