Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| para family protein | NQ519_01720 | Q72H90 | + | 443583 - 443756 | 6160.32 |
| is982 family transposase | NQ519_01725 | Q5JHA3 | - | 443924 - 444115 | 6913.45 |
| site-specific integrase | NQ519_01730 | Q93C64 | + | 444407 - 445636 | 47037.3 |
| site-specific integrase | NQ519_01735 | A5D2W6 | + | 445650 - 446870 | 47381.7 |
| hypothetical protein | NQ519_01740 | Not Available | + | 446892 - 447266 | 14279.4 |
| helix-turn-helix domain-containing protein | NQ519_01745 | Not Available | - | 447611 - 447916 | 12011.3 |
| helix-turn-helix domain-containing protein | NQ519_01750 | Not Available | - | 447970 - 448281 | 12433.0 |
| duf3408 domain-containing protein | NQ519_01755 | Not Available | + | 448697 - 449239 | 20618.3 |
| mobc family plasmid mobilization relaxosome protein | NQ519_01760 | Not Available | + | 449449 - 449826 | 14224.5 |
| relaxase/mobilization nuclease domain-containing protein | NQ519_01765 | Q00191 | + | 449823 - 450746 | 35468.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.