Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | NQ519_01420 | Q8AB53 | + | 362127 - 364076 | 73951.3 |
| glucosamine-6-phosphate deaminase | NQ519_01425 | A6LHV2 | + | 364096 - 364896 | 29829.6 |
| glycosyl hydrolase | NQ519_01430 | T2KNA8 | - | 364966 - 368175 | 117843.0 |
| lactaldehyde reductase | NQ519_01435 | P0A9S2 | - | 368188 - 369342 | 40637.8 |
| family 78 glycoside hydrolase catalytic domain | NQ519_01440 | P9WF03 | - | 369364 - 371139 | 65559.2 |
| laci family transcriptional regulator | NQ519_01445 | B5FF00 | + | 371495 - 372520 | 38902.8 |
| mfs transporter | NQ519_01450 | Q2YIJ8 | + | 372595 - 373761 | 41479.6 |
| hypothetical protein | NQ519_01455 | Not Available | - | 373878 - 375155 | 46319.1 |
| hypothetical protein | NQ519_01460 | Not Available | - | 375254 - 376471 | 44271.3 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_01465 | T2KPM5 | - | 376515 - 378473 | 73114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.