Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dam family site-specific dna-(adenine-n6)-methyltransferase | NQ519_05345 | Q58015 | - | 1368099 - 1369985 | 72929.9 |
| hipa domain-containing protein | NQ519_05350 | Q8EIX3 | - | 1370080 - 1371339 | 47994.4 |
| helix-turn-helix domain-containing protein | NQ519_05355 | Not Available | - | 1371343 - 1371648 | 11349.0 |
| response regulator | NQ519_05360 | T2KMF4 | - | 1372437 - 1376414 | 150594.0 |
| hypothetical protein | NQ519_05365 | Not Available | + | 1376701 - 1378713 | 75818.4 |
| glycoside hydrolase family 2 | NQ519_05370 | Q75W54 | + | 1378725 - 1381451 | 103851.0 |
| fad-dependent oxidoreductase | NQ519_05375 | Not Available | + | 1381448 - 1383310 | 68970.4 |
| family 43 glycosylhydrolase | NQ519_05380 | Q82P90 | + | 1383324 - 1384724 | 51641.7 |
| glycoside hydrolase family 88 protein | NQ519_05385 | O34559 | + | 1384773 - 1385972 | 46386.8 |
| glycoside hydrolase family 88 protein | NQ519_05390 | O34559 | + | 1385986 - 1387293 | 49467.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.