Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| family 20 glycosylhydrolase | NQ519_05245 | P49008 | - | 1337324 - 1339177 | 69984.3 |
| response regulator | NQ519_05250 | T2KMF4 | - | 1339309 - 1343316 | 151212.0 |
| glycoside hydrolase family 3 protein | NQ519_05255 | Q46684 | + | 1343760 - 1345994 | 82615.8 |
| glycoside hydrolase family 127 protein | NQ519_05260 | E8MGH8 | + | 1346007 - 1347944 | 72619.9 |
| duf4091 domain-containing protein | NQ519_05265 | Not Available | + | 1347965 - 1349686 | 64655.8 |
| duf3408 domain-containing protein | NQ519_05270 | Not Available | + | 1350223 - 1350741 | 19416.0 |
| site-specific integrase | NQ519_05275 | A8F7B4 | - | 1350972 - 1352243 | 48888.3 |
| proline--trna ligase | NQ519_05280 | Q8A988 | - | 1352568 - 1354052 | 56390.6 |
| outer membrane protein transport protein | NQ519_05285 | Not Available | - | 1354148 - 1355839 | 61825.2 |
| hypothetical protein | NQ519_05290 | Not Available | - | 1355870 - 1357009 | 41460.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.