Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | AB8809_12510 | Q8ZEG8 | Positive | 2726651 - 2728018 | 49900.6 |
| tryptophan synthase subunit beta | AB8809_12515 | C6DGZ5 | Positive | 2728032 - 2729225 | 43005.8 |
| tryptophan synthase subunit alpha | AB8809_12520 | C6DGZ4 | Positive | 2729225 - 2730031 | 28904.6 |
| oligogalacturonate-specific porin kdgm family protein | AB8809_12525 | Q934G3 | Positive | 2730416 - 2731147 | 27347.0 |
| outer membrane protein ompw | AB8809_12530 | P0A915 | Negative | 2731274 - 2731906 | 22925.4 |
| ykgj family cysteine cluster protein | AB8809_12535 | P0AAM0 | Positive | 2732190 - 2732594 | 14264.6 |
| ycic family protein | AB8809_12540 | C6DGZ0 | Positive | 2732653 - 2733405 | 26781.2 |
| septation protein a | AB8809_12545 | C6DGY9 | Positive | 2733605 - 2734171 | 21530.2 |
| acyl-coa thioester hydrolase ycia | AB8809_12550 | P0A8Z1 | Positive | 2734276 - 2734698 | 15160.2 |
| tonb system transport protein tonb | AB8809_12555 | P25945 | Negative | 2734828 - 2735586 | 27930.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.