Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| venn motif pre-toxin domain-containing protein | AB8809_11455 | Q3YL96 | Positive | 2502783 - 2503628 | 28240.4 |
| hypothetical protein | AB8809_11460 | Not Available | Positive | 2504151 - 2504471 | 11601.5 |
| hypothetical protein | AB8809_11465 | Not Available | Positive | 2504880 - 2505137 | 9612.1 |
| alpha/beta fold hydrolase | AB8809_11470 | P75311 | Negative | 2505194 - 2506057 | 32136.6 |
| lysr substrate-binding domain-containing protein | AB8809_11475 | P77559 | Positive | 2506174 - 2507100 | 34210.8 |
| lyse family translocator | AB8809_11480 | P0AG36 | Positive | 2507177 - 2507782 | 22060.3 |
| abc transporter substrate-binding protein | AB8809_11485 | Not Available | Positive | 2508361 - 2509482 | 42110.1 |
| pectate lyase | AB8809_11490 | P14005 | Negative | 2509700 - 2511406 | 63582.4 |
| oligogalacturonate-specific porin kdgm family protein | AB8809_11495 | P69857 | Negative | 2511514 - 2512266 | 28328.7 |
| oligogalacturonate-specific porin kdgm family protein | AB8809_11500 | Q934G3 | Negative | 2512398 - 2513216 | 31285.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.