Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system chaperone | AB8809_11405 | Not Available | Positive | 2479330 - 2479752 | 15534.0 |
| gntr family transcriptional regulator | AB8809_11410 | P76114 | Negative | 2479762 - 2480427 | 24747.1 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | AB8809_11415 | E0SDG9 | Positive | 2480763 - 2482427 | 62037.6 |
| hemagglutinin repeat-containing protein | AB8809_11420 | E0SDG8 | Positive | 2482485 - 2500010 | 604522.0 |
| hypothetical protein | AB8809_11425 | Not Available | Positive | 2500015 - 2500374 | 14100.5 |
| venn motif pre-toxin domain-containing protein | AB8809_11430 | A0A1S4NYE3 | Positive | 2500510 - 2501553 | 36952.9 |
| hypothetical protein | AB8809_11435 | Not Available | Positive | 2501550 - 2501855 | 11533.9 |
| hypothetical protein | AB8809_11440 | C4ZT30 | Negative | 2501901 - 2502068 | 6198.48 |
| hypothetical protein | AB8809_11445 | Not Available | Negative | 2502085 - 2502261 | 7030.57 |
| hypothetical protein | AB8809_11450 | Not Available | Positive | 2502284 - 2502637 | 13785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.