Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | AB8809_11355 | Not Available | Positive | 2465112 - 2465459 | 12876.7 |
| harpin hrpz family protein | AB8809_11360 | Q47279 | Positive | 2465605 - 2466687 | 35824.6 |
| type vi secretion system tip protein tssi/vgrg | AB8809_11365 | E0SAL0 | Positive | 2467192 - 2469162 | 72071.6 |
| duf4123 domain-containing protein | AB8809_11370 | Not Available | Positive | 2469155 - 2469967 | 31390.8 |
| hypothetical protein | AB8809_11375 | Not Available | Positive | 2469977 - 2471584 | 59604.3 |
| idsf | AB8809_11380 | Not Available | Positive | 2471535 - 2472473 | 35667.8 |
| type vi secretion system paar protein | AB8809_11385 | Not Available | Positive | 2472536 - 2472802 | 8415.93 |
| dna-binding protein | AB8809_11390 | Not Available | Negative | 2472904 - 2473227 | 12103.3 |
| hypothetical protein | AB8809_11395 | Not Available | Negative | 2473229 - 2474235 | 32526.5 |
| avre-family type 3 secretion system effector | AB8809_11400 | Not Available | Positive | 2474411 - 2479294 | 173260.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.