Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | AB8809_11305 | P77473 | Negative | 2457300 - 2458880 | 59171.7 |
| hrp pili protein hrpa | AB8809_11310 | Q6RK33 | Positive | 2459246 - 2459452 | 6841.06 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | AB8809_11315 | Not Available | Positive | 2459519 - 2459890 | 13101.2 |
| type iii secretion system inner membrane ring lipoprotein sctj | AB8809_11320 | Q01251 | Positive | 2459897 - 2460661 | 27904.0 |
| type iii secretion protein | AB8809_11325 | Not Available | Positive | 2460661 - 2461293 | 23759.5 |
| type iii secretion system stator protein sctl | AB8809_11330 | Not Available | Positive | 2461330 - 2461929 | 22535.9 |
| type iii secretion protein hrpf | AB8809_11335 | Not Available | Positive | 2462070 - 2462294 | 8039.38 |
| type iii secretion system chaperone | AB8809_11340 | Not Available | Positive | 2462281 - 2462715 | 15883.2 |
| type iii secretion system outer membrane ring subunit sctc | AB8809_11345 | Q01723 | Positive | 2462708 - 2464777 | 75603.9 |
| hrpt family type iii secretion system protein | AB8809_11350 | Not Available | Positive | 2464928 - 2465119 | 7002.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.