Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system hrpp c-terminal domain-containing protein | AB8809_11255 | Not Available | Negative | 2445946 - 2446491 | 20154.2 |
| type iii secretion protein | AB8809_11260 | Not Available | Negative | 2446488 - 2446925 | 17329.3 |
| type iii secretion system atpase sctn | AB8809_11265 | Q887B5 | Negative | 2446915 - 2448282 | 49282.0 |
| fha domain-containing protein | AB8809_11270 | Not Available | Negative | 2448282 - 2449211 | 33790.3 |
| type iii secretion system export apparatus subunit sctv | AB8809_11275 | P35654 | Negative | 2449221 - 2451323 | 77575.5 |
| type iii secretion system gatekeeper subunit sctw | AB8809_11280 | Q05395 | Negative | 2451320 - 2452528 | 44167.5 |
| rna polymerase sigma factor | AB8809_11285 | P37929 | Positive | 2452856 - 2453401 | 20783.0 |
| pas domain s-box protein | AB8809_11290 | P54663 | Positive | 2453644 - 2455113 | 55873.1 |
| response regulator | AB8809_11295 | Q7WZY4 | Positive | 2455150 - 2455791 | 23413.8 |
| sigma 54-interacting transcriptional regulator | AB8809_11300 | P36219 | Positive | 2456159 - 2457217 | 39411.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.