Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbh family protein | AB8809_10855 | P52645 | Positive | 2349085 - 2351676 | 96265.4 |
| ynbe family lipoprotein | AB8809_10860 | P64449 | Positive | 2351692 - 2351925 | 8415.16 |
| fmn-dependent nadh-azoreductase | AB8809_10865 | Q6D5N6 | Negative | 2351991 - 2352596 | 21786.1 |
| atp-dependent rna helicase hrpa | AB8809_10870 | P43329 | Positive | 2352933 - 2356820 | 148074.0 |
| ecsc family protein | AB8809_10875 | Not Available | Negative | 2356828 - 2357673 | 29724.0 |
| eal domain-containing protein | AB8809_10880 | O34311 | Negative | 2357720 - 2359498 | 66915.8 |
| serine protease | AB8809_10885 | P76176 | Negative | 2359959 - 2360780 | 30096.8 |
| type 1 fimbrial protein | AB8809_10890 | P0A1T1 | Negative | 2361096 - 2361398 | 10626.9 |
| type 1 fimbrial major subunit fima | AB8809_10895 | P55223 | Positive | 2362147 - 2362698 | 18351.2 |
| fimbria/pilus periplasmic chaperone | AB8809_10900 | P37923 | Positive | 2362787 - 2363491 | 25143.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.