Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation csta family protein | AB8809_10505 | P15078 | Negative | 2269260 - 2271323 | 74166.5 |
| mfs transporter | AB8809_10510 | P77389 | Negative | 2271839 - 2273020 | 40858.3 |
| lrp/asnc family transcriptional regulator | AB8809_10515 | O59188 | Positive | 2273092 - 2273595 | 18558.6 |
| aldo/keto reductase family oxidoreductase | AB8809_10520 | P42972 | Negative | 2273649 - 2274566 | 33736.3 |
| exoribonuclease ii | AB8809_10525 | C6DK05 | Negative | 2274771 - 2276705 | 72338.0 |
| fdhf/ydep family oxidoreductase | AB8809_10530 | Q8FHF8 | Negative | 2276942 - 2279254 | 84718.1 |
| lysr family transcriptional regulator | AB8809_10535 | P39647 | Positive | 2279674 - 2280576 | 33175.0 |
| laci family dna-binding transcriptional regulator | AB8809_10540 | P0ACN9 | Negative | 2280567 - 2281637 | 39208.3 |
| mfs transporter | AB8809_10545 | P0AA79 | Positive | 2281958 - 2283268 | 48036.4 |
| glycoside hydrolase family 31 protein | AB8809_10550 | Q9F234 | Positive | 2283303 - 2285669 | 91138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.