Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar filament capping protein flid | AB8809_09405 | Q56827 | Negative | 2034984 - 2036408 | 50582.6 |
| flagellin | AB8809_09410 | Q56826 | Positive | 2036676 - 2037542 | 29959.0 |
| methyltransferase regulatory domain-containing protein | AB8809_09415 | O82039 | Positive | 2037766 - 2041197 | 127755.0 |
| degt/dnrj/eryc1/strs family aminotransferase | AB8809_09420 | Q9XCW4 | Positive | 2041498 - 2042607 | 41536.0 |
| wbqc family protein | AB8809_09425 | P9WLW4 | Positive | 2042734 - 2043435 | 26996.5 |
| glycosylase | AB8809_09430 | P9WLW6 | Positive | 2043438 - 2044397 | 36998.5 |
| hypothetical protein | AB8809_09435 | P9WLW6 | Positive | 2044397 - 2045365 | 36540.0 |
| gnat family n-acetyltransferase | AB8809_09440 | Not Available | Positive | 2045353 - 2045805 | 16938.6 |
| class i sam-dependent methyltransferase | AB8809_09445 | A7GT53 | Positive | 2045802 - 2046542 | 28156.5 |
| hypothetical protein | AB8809_09450 | Not Available | Positive | 2046587 - 2048008 | 54326.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.