Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB8809_12210 | Not Available | Positive | 2656687 - 2657637 | 35789.5 |
| vf530 family dna-binding protein | AB8809_12215 | Q5E7H1 | Positive | 2657943 - 2658230 | 10640.7 |
| glycoside hydrolase family 10 protein | AB8809_12220 | Q8CW29 | Positive | 2658236 - 2659531 | 48501.6 |
| diaminobutyrate--2-oxoglutarate transaminase | AB8809_12225 | P56744 | Positive | 2659927 - 2661312 | 49679.1 |
| aspartate aminotransferase family protein | AB8809_12230 | Q43908 | Positive | 2661322 - 2662818 | 54573.4 |
| aromatic amino acid dmt transporter yddg | AB8809_12235 | D0ZXP9 | Positive | 2663117 - 2664028 | 32056.9 |
| tautomerase ppta | AB8809_12240 | C6DH49 | Negative | 2664050 - 2664280 | 8749.33 |
| hypothetical protein | AB8809_12245 | Not Available | Positive | 2664506 - 2665396 | 33240.1 |
| tyrosyl-trna deacylase | AB8809_12250 | Not Available | Positive | 2665425 - 2667263 | 68566.0 |
| hypothetical protein | AB8809_12255 | Not Available | Positive | 2667330 - 2667590 | 9288.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.