Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter permease | AB8809_11205 | Q9KTJ6 | Positive | 2436398 - 2437057 | 23576.6 |
| o-succinylbenzoate synthase | AB8809_11210 | B1A612 | Positive | 2437099 - 2438211 | 41374.0 |
| metq/nlpa family abc transporter substrate-binding protein | AB8809_11215 | Q9KTJ7 | Positive | 2438517 - 2439326 | 29608.9 |
| hypothetical protein | AB8809_11220 | Not Available | Negative | 2439471 - 2440888 | 51916.7 |
| lysr family transcriptional regulator | AB8809_11225 | P27111 | Positive | 2441032 - 2441958 | 34419.0 |
| type iii secretion system export apparatus subunit sctu | AB8809_11230 | P69986 | Negative | 2441969 - 2443048 | 40473.8 |
| type iii secretion system export apparatus subunit sctt | AB8809_11235 | P69984 | Negative | 2443061 - 2443864 | 29216.3 |
| type iii secretion system export apparatus subunit scts | AB8809_11240 | P69982 | Negative | 2443871 - 2444131 | 9220.06 |
| type iii secretion system export apparatus subunit sctr | AB8809_11245 | Q46646 | Negative | 2444139 - 2444792 | 23993.4 |
| type iii secretion system cytoplasmic ring protein sctq | AB8809_11250 | O85093 | Negative | 2444789 - 2445949 | 42223.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.