Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | AB8809_08005 | P37774 | Negative | 1764077 - 1764889 | 29810.1 |
| amino acid abc transporter permease | AB8809_08010 | P54536 | Negative | 1764913 - 1765578 | 25102.4 |
| amino acid abc transporter permease | AB8809_08015 | P0AEQ8 | Negative | 1765587 - 1766264 | 25302.5 |
| mmge/prpd family protein | AB8809_08020 | P54956 | Positive | 1766415 - 1767824 | 50213.2 |
| transporter substrate-binding domain-containing protein | AB8809_08025 | O34563 | Negative | 1767860 - 1768693 | 30934.0 |
| sensor histidine kinase | AB8809_08030 | P30847 | Negative | 1769041 - 1770240 | 45640.1 |
| response regulator transcription factor | AB8809_08035 | Q2FY79 | Negative | 1770246 - 1770935 | 25393.7 |
| mipa/ompv family protein | AB8809_08040 | Q9AB80 | Positive | 1771089 - 1771904 | 29242.0 |
| efflux rnd transporter periplasmic adaptor subunit | AB8809_08045 | A6TBH3 | Positive | 1771931 - 1773013 | 38271.7 |
| efflux rnd transporter permease subunit | AB8809_08050 | P25197 | Positive | 1773013 - 1776093 | 110265.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.